Chemical and biological indicators of soil quality in organic and conventional farming systems in Central Italy

In the past decade, there has been increased scientific interest in the so-called organic farming, especially in comparison with conventional agriculture. Many recent studies compare these two fundamentally different systems for soil properties, in different regions of the world. In this study, two adjacent fields in Central Italy, one managed according to organic, and the other according to conventional farming methods, were studied to determine the effects of these two agricultural systems on soil quality indicators at the farm level. Chemical and microbiological properties were chosen as indicators of soil quality and were measured at soil depth intervals of 5–20 and 20–35 cm, after 7 years of organic certified and conventional management methods. The field under organic management showed significantly better soil nutritional and microbiological conditions; with increased level of total nitrogen, nitrate and available phosphorus, and an increased microbial biomass content, and enzymatic activities (acid phosphatase, protease and dehydrogenase). No consistent increase in total organic carbon was observed. Results of the study suggest that, over the period of 7 year, organic management method strongly affects soil quality indicators. Large differences between the two soils were found in terms of microbiological properties, which are sensitive soil indicators of changes occurred under the different farming systems.     

Photosynthetic Performance and Pigment Composition of Leaves from two Tropical Species is Determined by Light Quality

Abstract: A suitable light quantity and quality is essential for optimal photosynthetic metabolism. Using combinations of three lamp types, the impact of the quality of artificial light conditions on the photosynthetic apparatus of leaves developed in growth chambers was analysed. The VIALOX‐Planta lamps are quite poor outside the green to orange (520 ‐ 620 nm) wavelength range, while the HQI‐BT lamps present a more uniform spectral intensity between 425 and 650 nm (blue to red). The halogen lamps are particularly rich in the red and far red range of the electromagnetic spectra. The lamps also differ in the red: far red ratio, which were 3.07 (VIALOX), 2.06 (HQI‐BT) and 1.12 (halogen). Clear positive effects were detected in most of the photosynthetic parameters in relation to light quality, both at stomatal and mesophyll levels. Despite some species‐dependent sensitivity to blue and red/far red wavelengths, observed among the studied parameters, the best photosynthetic performances of the test plants (Packyrhizus ahipa and Piatã, a hybrid of Coffea dewevrei×Coffea arabica) were obtained almost always with the reinforcement of blue (HQI‐BT lamps), red and far red (halogen lamps) wavelengths and with a red: far red ratio closer to that observed in nature. This suggests the involvement of more than one photoreceptor family in photosynthetic performance. Under such light conditions, increases in net photosynthesis and stomatal conductance were observed and, despite the moderate effects on photosynthetic capacity, strong effects were observed in the capture and transfer of light energy in the antennae pigments, photochemical efficiency of photosystem II and electron transport. This was related to the striking quantitative and qualitative impacts observed on total chlorophylls and carotenoids, which reached, in some cases, increases of 100 and 200 %, respectively. Among carotenoids, increases as high as 9‐fold for α‐carotene were observed (P. ahipa), with chlorophyll (a/b), total (chlorophyll/carotenoid) and carotene (α/β) ratios also strongly affected. This would have affected the structure and stability of photosynthetic membranes which, in turn, affected photosynthetic‐related processes (e.g., antennae pigments, photosystem II and electron transport efficiencies). This was particularly clear in the HQI + halogen treatment. The results unequivocally show that light quality could remain a clear limiting factor for leaf/plant development under artificial light conditions, which could be overcome using more than one lamp type, with complementary emission spectra.     

THE ROLE OF PERIPHYTON IN PHOSPHORUS RETENTION IN SHALLOW FRESHWATER AQUATIC SYSTEMS

Eutrophication caused by phosphorus (P) leads to water quality problems in aquatic systems, particularly freshwaters, worldwide. Processing of nutrients in shallow habitats removes P from water naturally and periphyton influences P removal from the water column in flowing waters and wetlands. Periphyton plays several roles in removing P from the water column, including P uptake and deposition, filtering particulate P from the water, and attenuating flow, which decreases advective transport of particulate and dissolved P from sediments. Furthermore, periphyton photosynthesis locally increases pH by up to 1 unit, which can lead to increased precipitation of calcium phosphate, concurrent deposition of carbonate-phosphate complexes, and long-term burial of P. Actively photosynthesizing periphyton can cause super-saturated O₂ concentrations near the sediment surface encouraging deposition of metal phosphates. However, anoxia associated with periphyton respiration at night may offset this effect. Linking the small-scale functional role of periphyton to ecosystem-level P retention will require more detailed studies in a variety of ecosystems or large mesocosms. A case study from the Everglades illustrates the importance of considering the role of periphyton in P removal from wetlands. In general, periphyton tends to increase P retention and deposition. In pilot-scale constructed periphyton-dominated wetlands in South Florida, about half of the inflowing total P was removed.     

C-terminal extension of phaseolin with a short methionine-rich sequence can inhibit trimerisation and result in high instability

In an attempt to increase the content in essential amino acids methionine and tryptophan of the trimeric storage protein phaseolin, we fused a Met- and Trp-rich sequence to the C-terminus of a phaseolin variant lacking its vacuolar sorting signal, with the aim to target the protein for secretion and accumulation into the apoplast. The fate of the mutant protein, denominated Y3, was studied in transiently transfected tobacco protoplasts. We report that the presence of the additional sequence causes structural defects which inhibit trimerization and lead to partial aggregation of Y3. The protein interacts with the ER chaperone BiP prior to being degraded very rapidly, in a process that does not require vesicular transport from the ER. The rate of degradation of Y3 is higher than that observed for another assembly defective mutant of phaseolin, 360, which remains monomeric and does not aggregate. This indicates that the plant ER quality control machinery can dispose of defective proteins with different kinetics and perhaps mechanisms, depending on the nature of their defect.     

Evaluation of an internal positive control for Cryptosporidium and Giardia testing in water samples

AIMS: An internal positive control for Cryptosporidium and Giardia monitoring was evaluated for use in routine water monitoring quality control. The control, known as ColorSeed C&G (BTF Pty Ltd, Sydney, Australia), is a suspension containing exactly 100 Cryptosporidium oocysts and 100 Giardia cysts that have been modified by attachment of Texas Red to the cell wall, allowing them to be differentiated from unmodified oocysts and cysts. The control enables recovery efficiencies to be determined for every water sample analysed. METHODS AND RESULTS: A total of 494 water samples were seeded with ColorSeed C&G and with unlabelled Cryptosporidium and Giardia and then analysed. Additionally, the robustness of the ColorSeed labelling was challenged with various chemical treatments. Recoveries were significantly lower for the ColorSeed Texas Red labelled Cryptosporidium and Giardia than recoveries of unlabelled Cryptosporidium and Giardia. However, the differences in recoveries were small. On average ColorSeed Cryptosporidium recoveries were 3.3% lower than unlabelled Cryptosporidium, and ColorSeed Giardia recoveries were 4% lower than unlabelled Giardia. CONCLUSIONS: ColorSeed C&G is suitable for use as an internal positive control for routine monitoring of both treated and raw water samples. SIGNIFICANCE AND IMPACT OF THE STUDY: The small differences in recoveries are unlikely to limit the usefulness of ColorSeed C&G as an internal positive control. The ColorSeed labelling was found to be robust after different treatments.     

Archaeobotanic evidence of the preincaic Chiribaya culture. Determination of capsaicinoids in archaeological samples of Capsicum frutescens and votive foods

The lack of Capsicum species or paprika (a basic ingredient of Peruvian foodstuff) in preincaic archaeological samples and votive foods, as evidenced by archaeobotanic studies, has stimulated the chemical analyses of these samples by HPLC methods. The results confirmed the absence of capsaicinoids in these samples whereas they were detected in more ancient fossil fruit.     

Determination of the triacylglycerol composition of coffee beans by reverse-phase high-performance liquid chromatography

Reverse-phase HPLC with refractive index and light scattering detectors in isocratic and gradient elution modes, respectively, was applied for the separation of the major triacylglycerols (TAG) in coffee lipids. Twelve TAG species could be identified and determined using a linear gradient of acetonitrile in dichloromethane: dichloroethane. The quantitative evaluation was based on the relative area percentages derived directly from a data-station. The procedure was applied to determine the TAG composition of three types of coffee beans harvested in two coffee producing areas in Brazil and dried by two commonly used procedures. No significant differences in the TAG compositions due to the type, origin and drying procedure were found.     

Intermittent drying of bioproducts--an overview

Unlike the conventional practice of supplying energy for batch drying processes at a constant rate, newly developed intermittent drying processes employ time-varying heat input tailored to match the drying kinetics of the material being dried. The energy required may be supplied by combining different modes of heat transfer (e.g. convection coupled with conduction or radiation or dielectric heating simultaneously or in a pre-selected sequence) in a time-varying fashion so as to provide optimal drying kinetics as well as quality of the bioproduct. This is especially important for drying of heat-sensitive materials (such as foods, pharmaceutical, neutraceutical substances, herbs, spices and herbal medicines). Intermittent heat supply is beneficial only for materials which dry primarily in the falling rate period where internal diffusion of heat and moisture controls the overall drying rate. Periods when little or no heat is supplied for drying allow the tempering period needed for the moisture and heat to diffuse within the material. As the moisture content increases at the surface of the biomaterial during the tempering period, the rate of drying is higher when heat input is resumed. It is possible to control the heat input such that the surface temperature of the product does not exceed a pre-determined value beyond which thermal damage of the material may occur. This process results in reduction in the use of thermal energy as well as the mass of air used in convective drying. Thus, the thermal efficiency of such a process is higher. The quality of the product, as such color and ascorbic acid content, is also typically superior to that obtained with a continuous supply of heat. However, in some cases, there will be a nominal increase in drying time. In the case of microwave-assisted and heat pump drying, for example, the capital cost of the drying system can also be reduced by drying in the intermittent mode.

This paper provides an overview of the basic process, selected results from experiments and mathematical models for a variety of biomaterials dried in a wide assortment of dryers. It begins with a classification of intermittent drying processes that may be applied e.g. time-varying temperature, air flow rate, operating pressure as well as heat input by different modes and in different temporal variations. The beneficial effects of improving the quality of dried bioproducts by different intermittent processes are also included and discussed.     

Micropropagation of calla lily (<Emphasis Type="Italic">Zantedeschia albomaculata</Emphasis>) via <Emphasis Type="Italic">in vitro</Emphasis> shoot tip proliferation

Summary A method for the micropropagation of Zantedeschia albomaculata is presented using shoot tip proliferation onto Murashige and Skoog (MS) medium supplemented with different plant growth regulator concentrations and combinations. Of the four cytokinins tested, 6-benzyladenine (BA) and thidiazuron (TDZ) were found to be more effective. An optimal concentration of BA (8.87 μM) or TDZ (4.54 μM) developed an average of 3.8 and 3.2 shoots per explant, respectively, but increasing concentrations of cytokinins often led to lower proliferation rate and stunted growth. Addition of auxins to the MS medium supplemented with 8.87 μM BA slightly enhanced multiple shoot formation in the explants. Multiplication of six cultivars of Zantedeschia genus comprising different flower types and colors were tested and achieved using only one regeneration medium (MS+8.87 μMBA+2.46 μM IBA). Different MS medium strength, air temperature (15, 20, 25, and 30°C) and light quality [fluorescent, red + blue, red and blue light provided by a LED (light-emitting diode) system] were used (without phytohormone) with the aim of stimulating in vitro shoot and root development. Half-strength MS or MS and cultures maintained at 25°C were found to be equally suitable for shoot tip culture of Z. albomaculata. Shoot elongation as well as fresh and dry weight were significantly increased when cultures were kept under red or blue light.     

Phenotypic plasticity and interpopulation differences in life history traits of<Emphasis Type="Italic"> Armadillidium vulgare</Emphasis> (Isopoda:Oniscidae)

The hypothesis that the balance of trade-offs between survivorship, growth and reproductive allocation in the terrestrial isopod Armadillidium vulgare will change when resource input is increased has been investigated experimentally. When the quality of food available was increased, by adding a mixture of litter from herbaceous dicotyledonous plants to a background low-quality food of dead grasses, survivorship was found to be the most phenotypically plastic trait, increasing by 168%. Growth rates increased by 99% but reproductive allocation by only 21%. In the field, members of a population from a site with more high-quality food grew more than twice as fast as those from a site where less high-quality food was available. The population from the site with higher food availability, contrary to predictions from the laboratory study, did not survive as well as that from the site with less available high-quality food. This may be because the site that is more favourable for growth has a more stressful physical environment due to much bigger temperature fluctuations, which are known to be an important cause of mortality in this species. When individuals from both populations were reared under controlled laboratory conditions, both the parental and F1 generations from the poor growth environment survived better than those from the good growth habitat. However, even when given an excess of high-quality food those from the poor growth environment continued to grow more slowly and had a lower reproductive allocation than those from the site with higher food availability. We conclude that microevolutionary changes may have occurred in the balance of resource allocation between survivorship, growth and reproductive allocation, to favour higher survivorship during the longer prereproductive period at the site where growth to the threshold size for reproduction takes longer.